CodiEsp is included in the 2020 Conference and Labs of the Evaluation Forum, eHealth track, this year, an online-only event.
Registration closes On September, 19th https://www.eventbrite.co.uk/e/clef-2020-conference-and-labs-of-the-evaluation-forum-tickets-116107862743
CodiEsp videos available on YouTube: https://www.youtube.com/playlist?list=PL5uSCzf1azhA0crlSVCYMPqMUWd4mXc4x
CLEF eHealth Schedule
Day 1: Wednesday 23rd September – Presentation
| Local Time (Amsterdam) | Title | Presenter | Affiliation | More info |
|---|---|---|---|---|
| 09:00-09:10 | Welcome and Introduction | Liadh Kelly | TBC | |
| 09:10-09:25 | Task 1 Overview: CodiEsp | Antonio Miranda-Escalada | Barcelona Supercomputing Center | TBC |
| 09:25-09:40 | Task 2 Overview | Lorraine Goeuriot, Zhengyang Liu, Chenchen Xu | TBC | |
| 09:40-10:25 | Task 1 participant presentations | |||
| FLE at CLEF eHealth 2020: Text Mining and Semantic Knowledge for Automated Clinical Encoding | Nuria García-Santa | Fujitsu Laboratories of Europe (FLE), Spain | TBC | |
| IAM at CLEF eHealth 2020: concept annotation in Spanish electronic health records | Sebastien Cossin | Univ. Bordeaux, France | TBC | |
| ICD-10 coding based on semantic distance: LSI_UNED at CLEF eHealth 2020 Task 1 | Mario Almagro | National University of Distance Education (UNED), Spain | TBC |
Day 2: Thursday 24th September – CodiEsp session
| Local Time (Amsterdam) | Title | Presenter | Affiliation | More info |
|---|---|---|---|---|
| 9:00-09:15 | Introduction and recap from CodiEsp Overview | Antonio Miranda-Escalada | Barcelona Supercomputing Center | TBC |
| 09:15-10:20 | Task 1 participant presentations | |||
| ICB-UMA at CLEF e-Health 2020 Task 1: Automatic ICD-10 coding in Spanish with BERT | Guillermo López-García | Universidad de Málaga, Spain | video | |
| A study of Machine Learning models for Clinical Coding of Medical Reports at CodiEsp 2020 | Marco Polignano | University of Bari Aldo Moro, Italy. | TBC | |
| Using the R Tidyverse for Multilingual Information Extraction. IMS UniPD ad CLEF eHealth 2020 Task 1 | Giorgio Maria Di Nunzio | University of Padua, Italy | video | |
| IXA-AAA at CLEF eHealth 2020 CodiEsp Automatic classification of medical records with Multi-label Classifiers and Similarity Match Coders | Alberto Blanco | University of the Basque Country UPV/EHU, Spain | TBC | |
| Text Augmentation Techniques for Clinical Case Classification | Anais Ollagnier | University of Exeter, UK | video | |
| Convolutional Attention Models with Post-Processing Heuristics at CLEF eHealth 2020 | Elias Moons | KU Leuven, Belgium | TBC | |
| Fraunhofer AICOS at CLEF eHealth 2020 Task 1: Clinical Code Extraction From Textual Data Using Fine-Tuned BERT Models | João Costa | Fraunhofer Portugal AICOS, Portugal | video | |
| Multilingual ICD-10 Code Assignment with Transformer Architectures using MIMIC-III Discharge Summaries | Henning Schäfer | University of Applied Sciences and Arts Dortmund, Germany | TBC | |
| 10:20-10:30 | Closing remarks and wrapup | Antonio Miranda-Escalada | Barcelona Supercomputing Center | TBC |
Day 3: Friday 25th September – Consumer Health Search
| Local Time (Amsterdam) | Title | Presenter | Affiliation | More info |
|---|---|---|---|---|
| 09:00-09:40 | TBC | Marco Viviani | TBC | |
| 09:40-10:10 | Task 2 participant presentations | |||
| SandiDoc at CLEF 2020 - Consumer Health Search : AdHoc IR Task | Sandaru Seneviratne | TBC | ||
| A Study on Reciprocal Ranking Fusion in Consumer Health Search | Giorgio Di Nunzio | TBC | ||
| 10:10-10:30 | Discussion and wrapup | Lorraine Goeuriot | TBC |
Citations
Participants’ working notes will be published in the CEUR-WS proceedings (http://ceur-ws.org/). Task overview paper will also be published in the CEUR-WS proceedings.
@InProceedings{CLEFeHealth2020Task1Overview,
author={Antonio Miranda-Escalada and Aitor Gonzalez-Agirre and Jordi Armengol-Estapé and Martin Krallinger},
title="Overview of automatic clinical coding: annotations, guidelines, and solutions for non-English clinical cases at CodiEsp track of {CLEF eHealth} 2020",
booktitle = {{Working Notes of Conference and Labs of the Evaluation (CLEF) Forum}},
series = {{CEUR} Workshop Proceedings},
year = {2020},
}
Since CodiEsp is part of CLEF eHealth lab, lab overview paper will be published in the Springer LNCS proceedings.
@InProceedings{CLEFeHealth2020LabOverview,
author={Lorraine Goeuriot and Hanna Suominen and Liadh Kelly and Antonio Miranda-Escalada and Martin Krallinger and Zhengyang Liu and Gabriella Pasi and Gabriela {Saez Gonzales} and Marco Viviani and Chenchen Xu},
title="Overview of the {CLEF eHealth} Evaluation Lab 2020},
booktitle = {{Experimental IR Meets Multilinguality, Multimodality, and Interaction: Proceedings of the Eleventh International Conference of the CLEF Association (CLEF 2020)
}},
series = {LNCS Volume number: 12260},
year = {2020},
editor = {Avi Arampatzis and Evangelos Kanoulas and Theodora Tsikrika and Stefanos Vrochidis and Hideo Joho and Christina Lioma and Carsten Eickhoff and Aurélie Névéol and Linda Cappellato andNicola Ferro},
}