All proceedings available at: http://ceur-ws.org/Vol-2936/

MESINESP overview paper:

  • Overview of BioASQ 2021-MESINESP track. Evaluation of advance hierarchical classification techniques for scientific literature, patents and clinical trials. Luis GascoAnastasios NentidisAnastasia KritharaDarryl Estrada-ZavalaRenato Toshiyuki MurasakiElena Primo-PeñaCristina Bojo-CanalesGeorgios PaliourasMartin Krallinger. Proceedings of the Working Notes of CLEF 2021 – Conference and Labs of the Evaluation Forum , CEUR Workshop Proceedings. 165-187 (2021).

General BioASQ overview paper:

  • Overview of BioASQ 2021: The ninth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Luis Gasco, Martin Krallinger, Georgios Paliouras.

Participants’ papers:

  • Vicomtech at MESINESP2: BERT-based Multi-label Classification Models for Biomedical Text Indexing. Aitor García-PablosNaiara PerezMontse Cuadros. Proceedings of the Working Notes of CLEF 2021 – Conference and Labs of the Evaluation Forum , CEUR Workshop Proceedings. 221-230 (2021).
  • PIDNA at BioASQ MESINESP: Hybrid Semantic Indexing for Biomedical Articles in Spanish. Yi HuangBuse GiledereliAbdullatif KoksalArzucan OzgurElif Ozkirimli. Proceedings of the Working Notes of CLEF 2021 – Conference and Labs of the Evaluation Forum , CEUR Workshop Proceedings. 241-246 (2021).
  • COLE and LYS at BioASQ MESINESP Task: large scale multilabel text categorization with sparse and dense indices. Francisco J. Ribadas-PenaShuyuan CaoElmurod Kuriyozov. Proceedings of the Working Notes of CLEF 2021 – Conference and Labs of the Evaluation Forum , CEUR Workshop Proceedings. 313-323 (2021).
  • LASIGE-BioTM at MESINESP2: entity linking with semantic similarity and extreme multi-label classification on Spanish biomedical documents. Pedro RuasVitor D. T. AndradeFrancisco M. Couto. Proceedings of the Working Notes of CLEF 2021 – Conference and Labs of the Evaluation Forum , CEUR Workshop Proceedings. 324-334 (2021).