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Submission – ToxHabits
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Submission

The evaluation of the competition will be done against a manually annotated data set purposely created for this task.

Submission format

Both subtasks, ToxNER (Subtask 1) and ToxUse (Subtask 2), share the same submission format.

Participating teams must generate a TSV file for each subtask containing the annotations detected in the test documents, following the column structure below:

  • File name (filename): Name of the file from which the entity mention has been extracted
  • Mention label (label): The category of the entity.
    • For ToxNER (Subtask 1), the entities could be: Tobacco, Alcohol, Drug, Cannabis
    • For ToxUse (Subtask 2) the entities could be: Amount, Type, Frequency, Duration, Method, History
  • Starting character offset (off0): Character index where the detected mention starts.
  • Ending character offset (off1): Character index where the detected mention ends.
  • Mention span (span): Mention extracted from the text (i.e., the text of the entity)

Example (submission.tsv):

Submission Procedure

The submissions must be sent via email to < wesam.alnabki.bsc [at] gmail.com >.

All submissions must follow the instructions below:

  1. Submission Limit:
    • Each team may submit up to 5 runs per subtask (ToxNER and/or ToxUse).
  2. Submission Format:
    • Submit one single ZIP file containing your runs with the following structure:
      • A subdirectory for each subtask you are participating in (e.g., ToxNER/, ToxUse/).
      • A README.txt file in the root directory including the following:
        • Team name (same as registered)
        • Team contact person (name and email)
        • Concise description of each run
        • Any extra resources used (e.g., dictionaries, external data, pre-trained models)
      ⚠️ Submissions without a README.txt will not be counted towards the task.
  3. Naming Runs:
    • If you submit multiple runs for a subtask, name the TSV files clearly and sequentially:
      • Example: 1-baseline.tsv, 2-bert-model.tsv, etc.
  4. ZIP File Naming Convention:
    • Your ZIP file must include:
      • Team name (as used in registration)
      • Subtask(s) covered
      • Submission date as a timestamp (YYYYMMDD)
      • Example:
        toxhabits_teamname_toxner_20240528.zip
        toxhabits_teamname_toxuse_20240528.zip
  5. TSV File Requirements:
    • Submissions must be in tab-separated files (.tsv) with the following:
      • One row per detected mention
      • The required columns: filename, label, off0, off1, span
      • A header row with column names
      • One file per system/run